webinterface.pages.pages_variables.Quant.lfq_DDA_peptidoform_variables module

Variables for the DDA quantification - peptidoform module.

class webinterface.pages.pages_variables.Quant.lfq_DDA_peptidoform_variables.VariablesDDAQuant(all_datapoints: str = 'all_datapoints_dda_quant_peptidoform', all_datapoints_submission: str = 'all_datapoints_submission_dda_quant_peptidoform', input_df_submission: str = 'input_df_submission_dda_quant_peptidoform', result_performance_submission: str = 'result_performance_submission_dda_quant_peptidoform', submit: str = 'submit_dda_quant_peptidoform', fig_logfc: str = 'fig_logfc_dda_quant_peptidoform', fig_metric: str = 'fig_metric_dda_quant_peptidoform', fig_cv: str = 'fig_CV_violinplot_dda_quant_peptidoform', fig_ma_plot: str = 'fig_ma_plot_dda_quant_peptidoform', fig_prefix: str = 'fig_dda_quant_peptidoform_', result_perf: str = 'result_perf_dda_quant_peptidoform', meta_data: str = 'meta_data_dda_quant_peptidoform', input_df: str = 'input_df_dda_quant_peptidoform', meta_file_uploader_uuid: str = 'meta_file_uploader_uuid_dda_quant_peptidoform', comments_submission_uuid: str = 'comments_submission_uuid_dda_quant_peptidoform', check_submission_uuid: str = 'check_submission_uuid_dda_quant_peptidoform', meta_data_text: str = 'comments_for_submission_dda_quant_peptidoform', check_submission: str = 'check_submission_dda_quant_peptidoform', button_submission_uuid: str = 'button_submission_uuid_dda_quant_peptidoform', df_head: str = 'df_head_dda_quant_peptidoform', placeholder_fig_compare: str = 'placeholder_fig_compare_dda_quant_peptidoform', all_datapoints_submitted: str = 'all_datapoints_submitted_dda_quant_peptidoform', placeholder_table_submitted: str = 'placeholder_table_submitted_dda_quant_peptidoform', placeholder_slider_submitted: str = 'placeholder_slider_submitted_dda_quant_peptidoform', highlight_list_submitted: List[str] = <factory>, selectbox_id_submitted_uuid: str = 'selectbox_id_submitted_dda_quant_peptidoform', selectbox_id_uuid: str = 'selectbox_id_dda_quant_peptidoform', selectbox_id_indepth_uuid: str = 'selectbox_id_indepth_dda_quant_peptidoform', colorblind_mode_selector_uuid: str = 'colorblind_mode_selector_dda_quant_peptidoform', colorblind_mode_selector_submitted_uuid: str = 'colorblind_mode_selector_submitted_dda_quant_peptidoform', colorblind_mode_selector_indepth_uuid: str = 'colorblind_mode_selector_indepth_dda_quant_peptidoform', slider_id_submitted_uuid: str = 'slider_id_submitted_dda_quant_peptidoform', slider_id_uuid: str = 'slider_id_dda_quant_peptidoform', slider_id_indepth_uuid: str = 'slider_id_indepth_dda_quant_peptidoform', download_selector_id_uuid: str = 'download_selector_id_dda_quant_peptidoform', table_id_uuid: str = 'table_id_dda_quant_peptidoform', table_new_results_uuid: str = 'table_new_results_uuid_dda_quant_peptidoform', result_plot_uuid: str = 'result_figure_uuid_dda_quant_peptidoform', result_submitted_plot_uuid: str = 'result_submitted_figure_uuid_dda_quant_peptidoform', metric_selector_uuid: str = 'metric_selector_uuid_dda_quant_peptidoform', metric_selector_submitted_uuid: str = 'metric_selector_submitted_uuid_dda_quant_peptidoform', metric_selector_indepth_uuid: str = 'metric_selector_indepth_uuid_dda_quant_peptidoform', metric_calc_approach_selector_submitted_uuid: str = 'metric_calc_approach_selector_submitted_uuid_dda_quant_peptidoform', metric_calc_approach_selector_uuid: str = 'metric_calc_approach_selector_uuid_dda_quant_peptidoform', metric_calc_approach_selector_indepth_uuid: str = 'metric_calc_approach_selector_indepth_uuid_dda_quant_peptidoform', metric_plot_labels: List[str] = <factory>, placeholder_table: str = 'placeholder_table_dda_quant_peptidoform', placeholder_slider: str = 'placeholder_slider_dda_quant_peptidoform', placeholder_dataset_selection_container: str = 'placeholder_dataset_selection_container_dda_quant_peptidoform', dataset_selector_id_uuid: str = 'dataset_selector_id_dda_quant_peptidoform', placeholder_downloads_container: str = 'placeholder_downloads_container_dda_quant_peptidoform', highlight_list: List[str] = <factory>, first_new_plot: bool = True, default_val_slider: int = 3, max_nr_observed: int = 6, beta_warning: bool = True, alpha_warning: bool = False, archived_warning: bool = False, github_link_pr: str = 'github.com/Proteobot/Results_quant_peptidoform_DDA.git', sidebar_label: str = 'Quant LFQ DDA peptidoform', sidebar_path: str = '/Quant_LFQ_DDA_peptidoform', sidebar_category: str = 'DDA', keywords: List[str] = <factory>, additional_params_json: str = '../proteobench/io/params/json/Quant/quant_lfq_DDA_peptidoform.json', description_module_md: str = 'pages/markdown_files/Quant/lfq/DDA/peptidoform/introduction_DDA_quan_peptidoforms.md', description_files_md: str = 'pages/markdown_files/Quant/lfq/DDA/peptidoform/file_description.md', description_input_file_md: str = 'pages/markdown_files/Quant/lfq/DDA/peptidoform/input_file_description.md', description_slider_md: str = 'pages/markdown_files/Quant/lfq/DDA/peptidoform/slider_description.md', description_table_md: str = 'pages/markdown_files/Quant/lfq/DDA/peptidoform/table_description.md', description_results_md: str = 'pages/markdown_files/Quant/lfq/DDA/peptidoform/result_description.md', description_submission_md: str = 'pages/markdown_files/Quant/lfq/DDA/peptidoform/submit_description.md', parse_settings_dir: str = '../proteobench/io/parsing/io_parse_settings/Quant/lfq/DDA/peptidoform/', texts: Type[WebpageTexts] = <class 'pages.texts.generic_texts.WebpageTexts'>, doc_url: str = 'https://proteobench.readthedocs.io/en/latest/available-modules/active-modules/3-quant-lfq-peptidoform-dda/', title: str = 'DDA peptidoform quantification', prefix_params: str = 'lfq_peptidoform_dda_quant_', params_json_dict: str = 'params_json_dict_lfq_peptidoform_dda_quant', params_file_dict: str = 'params_file_dict_lfq_peptidoform_dda_quant')

Bases: object

Variables for the DDA quantification - peptidoform module.

additional_params_json: str = '../proteobench/io/params/json/Quant/quant_lfq_DDA_peptidoform.json'

all_datapoints: str = 'all_datapoints_dda_quant_peptidoform'

all_datapoints_submission: str = 'all_datapoints_submission_dda_quant_peptidoform'

all_datapoints_submitted: str = 'all_datapoints_submitted_dda_quant_peptidoform'

alpha_warning: bool = False

archived_warning: bool = False

beta_warning: bool = True

button_submission_uuid: str = 'button_submission_uuid_dda_quant_peptidoform'

check_submission: str = 'check_submission_dda_quant_peptidoform'

check_submission_uuid: str = 'check_submission_uuid_dda_quant_peptidoform'

colorblind_mode_selector_indepth_uuid: str = 'colorblind_mode_selector_indepth_dda_quant_peptidoform'

colorblind_mode_selector_submitted_uuid: str = 'colorblind_mode_selector_submitted_dda_quant_peptidoform'

colorblind_mode_selector_uuid: str = 'colorblind_mode_selector_dda_quant_peptidoform'

comments_submission_uuid: str = 'comments_submission_uuid_dda_quant_peptidoform'

dataset_selector_id_uuid: str = 'dataset_selector_id_dda_quant_peptidoform'

default_val_slider: int = 3

description_files_md: str = 'pages/markdown_files/Quant/lfq/DDA/peptidoform/file_description.md'

description_input_file_md: str = 'pages/markdown_files/Quant/lfq/DDA/peptidoform/input_file_description.md'

description_module_md: str = 'pages/markdown_files/Quant/lfq/DDA/peptidoform/introduction_DDA_quan_peptidoforms.md'

description_results_md: str = 'pages/markdown_files/Quant/lfq/DDA/peptidoform/result_description.md'

description_slider_md: str = 'pages/markdown_files/Quant/lfq/DDA/peptidoform/slider_description.md'

description_submission_md: str = 'pages/markdown_files/Quant/lfq/DDA/peptidoform/submit_description.md'

description_table_md: str = 'pages/markdown_files/Quant/lfq/DDA/peptidoform/table_description.md'

df_head: str = 'df_head_dda_quant_peptidoform'

doc_url: str = 'https://proteobench.readthedocs.io/en/latest/available-modules/active-modules/3-quant-lfq-peptidoform-dda/'

download_selector_id_uuid: str = 'download_selector_id_dda_quant_peptidoform'

fig_cv: str = 'fig_CV_violinplot_dda_quant_peptidoform'

fig_logfc: str = 'fig_logfc_dda_quant_peptidoform'

fig_ma_plot: str = 'fig_ma_plot_dda_quant_peptidoform'

fig_metric: str = 'fig_metric_dda_quant_peptidoform'

fig_prefix: str = 'fig_dda_quant_peptidoform_'

first_new_plot: bool = True

github_link_pr: str = 'github.com/Proteobot/Results_quant_peptidoform_DDA.git'

highlight_list: List[str]

highlight_list_submitted: List[str]

input_df: str = 'input_df_dda_quant_peptidoform'

input_df_submission: str = 'input_df_submission_dda_quant_peptidoform'

keywords: List[str]

max_nr_observed: int = 6

meta_data: str = 'meta_data_dda_quant_peptidoform'

meta_data_text: str = 'comments_for_submission_dda_quant_peptidoform'

meta_file_uploader_uuid: str = 'meta_file_uploader_uuid_dda_quant_peptidoform'

metric_calc_approach_selector_indepth_uuid: str = 'metric_calc_approach_selector_indepth_uuid_dda_quant_peptidoform'

metric_calc_approach_selector_submitted_uuid: str = 'metric_calc_approach_selector_submitted_uuid_dda_quant_peptidoform'

metric_calc_approach_selector_uuid: str = 'metric_calc_approach_selector_uuid_dda_quant_peptidoform'

metric_plot_labels: List[str]

metric_selector_indepth_uuid: str = 'metric_selector_indepth_uuid_dda_quant_peptidoform'

metric_selector_submitted_uuid: str = 'metric_selector_submitted_uuid_dda_quant_peptidoform'

metric_selector_uuid: str = 'metric_selector_uuid_dda_quant_peptidoform'

params_file_dict: str = 'params_file_dict_lfq_peptidoform_dda_quant'

params_json_dict: str = 'params_json_dict_lfq_peptidoform_dda_quant'

parse_settings_dir: str = '../proteobench/io/parsing/io_parse_settings/Quant/lfq/DDA/peptidoform/'

placeholder_dataset_selection_container: str = 'placeholder_dataset_selection_container_dda_quant_peptidoform'

placeholder_downloads_container: str = 'placeholder_downloads_container_dda_quant_peptidoform'

placeholder_fig_compare: str = 'placeholder_fig_compare_dda_quant_peptidoform'

placeholder_slider: str = 'placeholder_slider_dda_quant_peptidoform'

placeholder_slider_submitted: str = 'placeholder_slider_submitted_dda_quant_peptidoform'

placeholder_table: str = 'placeholder_table_dda_quant_peptidoform'

placeholder_table_submitted: str = 'placeholder_table_submitted_dda_quant_peptidoform'

prefix_params: str = 'lfq_peptidoform_dda_quant_'

result_perf: str = 'result_perf_dda_quant_peptidoform'

result_performance_submission: str = 'result_performance_submission_dda_quant_peptidoform'

result_plot_uuid: str = 'result_figure_uuid_dda_quant_peptidoform'

result_submitted_plot_uuid: str = 'result_submitted_figure_uuid_dda_quant_peptidoform'

selectbox_id_indepth_uuid: str = 'selectbox_id_indepth_dda_quant_peptidoform'

selectbox_id_submitted_uuid: str = 'selectbox_id_submitted_dda_quant_peptidoform'

selectbox_id_uuid: str = 'selectbox_id_dda_quant_peptidoform'

sidebar_category: str = 'DDA'

sidebar_label: str = 'Quant LFQ DDA peptidoform'

sidebar_path: str = '/Quant_LFQ_DDA_peptidoform'

slider_id_indepth_uuid: str = 'slider_id_indepth_dda_quant_peptidoform'

slider_id_submitted_uuid: str = 'slider_id_submitted_dda_quant_peptidoform'

slider_id_uuid: str = 'slider_id_dda_quant_peptidoform'

submit: str = 'submit_dda_quant_peptidoform'

table_id_uuid: str = 'table_id_dda_quant_peptidoform'

table_new_results_uuid: str = 'table_new_results_uuid_dda_quant_peptidoform'

texts

alias of WebpageTexts

title: str = 'DDA peptidoform quantification'