webinterface.pages.texts.generic_texts_dia module

Generic texts for the ProteoBench web interface.

class webinterface.pages.texts.generic_texts_dia.WebpageTexts

Bases: object

Generic texts for the ProteoBench web interface.

class Help

Bases: object

Help texts for the DIA quantification - precursor ions module.

input_file = '\n            Output file of the software tool. More information on the accepted format can\n            be found [here](https://proteobench.readthedocs.io/en/latest/modules/3-DIA-Quantification-ion-level/)\n            '

input_format = '\n            Please select the software you used to generate the results. If it is not yet\n            implemented in ProteoBench, you can use a tab-delimited format that is described\n            further [here](https://proteobench.readthedocs.io/en/latest/modules/3-DIA-Quantification-ion-level/)\n        '

meta_data_file = '\n            Please add a file with meta data that contains all relevant information about\n            your search parameters. See [here](https://proteobench.readthedocs.io/en/latest/modules/3-DIA-Quantification-ion-level/)\n            for all compatible parameter files.\n        '

parse_button = '\n            Click here to see the output of your benchmark run\n        '

pull_req = '\n            It is open to the public indefinitely.\n            '

class ShortMessages

Bases: object

Short messages for the DIA quantification - precursor ions module.

initial_parameters = '\n            Additionally, you can fill out some information on the paramters that were\n            used for this benchmark run bellow. These will be printed when hovering on your point.\n            '

initial_results = '\n            Scroll down if you want to see the public benchmark runs publicly available\n            today.\n            '

legal_notice = 'https://www.ruhr-uni-bochum.de/en/legal-notice'

no_results = 'No results available for this module.'

parameters_additional = 'Anything else you want to let us know? Please specifically\n            add changes in your search parameters here, that are not obvious from the parameter file.\n            '

privacy_notice = 'https://www.ruhr-uni-bochum.de/en/privacy-notice'

run_instructions = '\n            Now, press `Parse and Bench` to calculate the metrics from your input.\n            '

submission_processing_warning = '\n            **It will take a few working days for your point to be added to the plot**\n            '

submission_result_description = '\n            New figure including your benchmark run. The point corresponding to\n            your data will appear bigger than the public data sets already available\n            in ProteoBench.\n            '

title = 'DIA quantification - precursor ions'

warning_alpha = 'This module is in ALPHA phase. It has not yet passed peer review \n            and should be used with caution.\n            '

warning_archived = 'This module is in ARCHIVED phase. The figure presented below \n            and the metrics calculation will no longer be updated. See module documentation \n            for more details.\n            '

warning_beta = 'This module is in BETA phase. The figure presented below and \n            the metrics calculation may change in the near future.\n            '