webinterface.pages.pages_variables.Quant.lfq_DDA_ion_QExactive_variables module

Variables for the DDA quantification - precursor ions module.

class webinterface.pages.pages_variables.Quant.lfq_DDA_ion_QExactive_variables.VariablesDDAQuant(all_datapoints: str = 'all_datapoints', all_datapoints_submission: str = 'all_datapoints_submission', input_df_submission: str = 'input_df_submission', result_performance_submission: str = 'result_performance_submission', submit: str = 'submit', fig_logfc: str = 'fig_logfc', fig_metric: str = 'fig_metric', fig_cv: str = 'fig_CV_violinplot', fig_ma_plot: str = 'fig_ma_plot', fig_prefix: str = 'fig_dda_quant_QExactive_', result_perf: str = 'result_perf', meta_data: str = 'meta_data', input_df: str = 'input_df', meta_file_uploader_uuid: str = 'meta_file_uploader_uuid', comments_submission_uuid: str = 'comments_submission_uuid', check_submission_uuid: str = 'check_submission_uuid', meta_data_text: str = 'comments_for_submission', check_submission: str = 'heck_submission', button_submission_uuid: str = 'button_submission_uuid', df_head: str = 'df_head', placeholder_fig_compare: str = 'placeholder_fig_compare', all_datapoints_submitted: str = 'all_datapoints_submitted', placeholder_table_submitted: str = 'placeholder_table_submitted', placeholder_slider_submitted: str = 'placeholder_slider_submitted', highlight_list_submitted: List[str] = <factory>, selectbox_id_submitted_uuid: str = 'selectbox_id_submitted', selectbox_id_uuid: str = 'selectbox_id', slider_id_submitted_uuid: str = 'slider_id_submitted', slider_id_uuid: str = 'slider_id', download_selector_id_uuid: str = 'download_selector_id', table_id_uuid: str = 'table_id', table_new_results_uuid: str = 'table_new_results_uuid', result_plot_uuid: str = 'result_figure_uuid', result_submitted_plot_uuid: str = 'result_submitted_figure_uuid', metric_selector_uuid: str = 'metric_selector_uuid', metric_selector_submitted_uuid: str = 'metric_selector_submitted_uuid', metric_calc_approach_selector_submitted_uuid: str = 'metric_calc_approach_selector_submitted_uuid', metric_calc_approach_selector_uuid: str = 'metric_calc_approach_selector_uuid', metric_plot_labels: List[str] = <factory>, placeholder_table: str = 'placeholder_table', placeholder_slider: str = 'placeholder_slider', placeholder_dataset_selection_container: str = 'placeholder_dataset_selection_container', dataset_selector_id_uuid: str = 'dataset_selector_id', placeholder_downloads_container: str = 'placeholder_downloads_container', highlight_list: List[str] = <factory>, first_new_plot: bool = True, default_val_slider: int = 3, alpha_warning: bool = False, beta_warning: bool = True, archived_warning: bool = False, github_link_pr: str = 'github.com/Proteobot/Results_quant_ion_DDA.git', sidebar_label: str = 'Quant LFQ DDA ion QExactive', sidebar_path: str = '/Quant_LFQ_DDA_ion_QExactive', sidebar_category: str = 'DDA', keywords: List[str] = <factory>, description_module_md: str = 'pages/markdown_files/Quant/lfq/DDA/ion/QExactive/introduction_DDA_quan_ions.md', description_files_md: str = 'pages/markdown_files/Quant/lfq/DDA/ion/QExactive/file_description.md', description_input_file_md: str = 'pages/markdown_files/Quant/lfq/DDA/ion/QExactive/input_file_description.md', description_slider_md: str = 'pages/markdown_files/Quant/lfq/DDA/ion/QExactive/slider_description.md', description_table_md: str = 'pages/markdown_files/Quant/lfq/DDA/ion/QExactive/table_description.md', description_results_md: str = 'pages/markdown_files/Quant/lfq/DDA/ion/QExactive/result_description.md', description_submission_md: str = 'pages/markdown_files/Quant/lfq/DDA/ion/QExactive/submit_description.md', parse_settings_dir: str = '../proteobench/io/parsing/io_parse_settings/Quant/lfq/DDA/ion/QExactive', texts: Type[WebpageTexts] = <class 'pages.texts.generic_texts.WebpageTexts'>, doc_url: str = 'https://proteobench.readthedocs.io/en/latest/available-modules/active-modules/2-quant-lfq-ion-dda/', additional_params_json: str = '../proteobench/io/params/json/Quant/quant_lfq_DDA_ion.json', title: str = 'DDA Precursor quantification (QExactive)', prefix_params: str = 'lfq_ion_dda_quant_', params_json_dict: str = 'params_json_dict_lfq_ion_dda_quant', params_file_dict: str = 'params_file_dict_lfq_ion_dda_quant')

Bases: object

Variables for the DDA quantification - precursor ions module.

additional_params_json: str = '../proteobench/io/params/json/Quant/quant_lfq_DDA_ion.json'

all_datapoints: str = 'all_datapoints'

all_datapoints_submission: str = 'all_datapoints_submission'

all_datapoints_submitted: str = 'all_datapoints_submitted'

alpha_warning: bool = False

archived_warning: bool = False

beta_warning: bool = True

button_submission_uuid: str = 'button_submission_uuid'

check_submission: str = 'heck_submission'

check_submission_uuid: str = 'check_submission_uuid'

comments_submission_uuid: str = 'comments_submission_uuid'

dataset_selector_id_uuid: str = 'dataset_selector_id'

default_val_slider: int = 3

description_files_md: str = 'pages/markdown_files/Quant/lfq/DDA/ion/QExactive/file_description.md'

description_input_file_md: str = 'pages/markdown_files/Quant/lfq/DDA/ion/QExactive/input_file_description.md'

description_module_md: str = 'pages/markdown_files/Quant/lfq/DDA/ion/QExactive/introduction_DDA_quan_ions.md'

description_results_md: str = 'pages/markdown_files/Quant/lfq/DDA/ion/QExactive/result_description.md'

description_slider_md: str = 'pages/markdown_files/Quant/lfq/DDA/ion/QExactive/slider_description.md'

description_submission_md: str = 'pages/markdown_files/Quant/lfq/DDA/ion/QExactive/submit_description.md'

description_table_md: str = 'pages/markdown_files/Quant/lfq/DDA/ion/QExactive/table_description.md'

df_head: str = 'df_head'

doc_url: str = 'https://proteobench.readthedocs.io/en/latest/available-modules/active-modules/2-quant-lfq-ion-dda/'

download_selector_id_uuid: str = 'download_selector_id'

fig_cv: str = 'fig_CV_violinplot'

fig_logfc: str = 'fig_logfc'

fig_ma_plot: str = 'fig_ma_plot'

fig_metric: str = 'fig_metric'

fig_prefix: str = 'fig_dda_quant_QExactive_'

first_new_plot: bool = True

github_link_pr: str = 'github.com/Proteobot/Results_quant_ion_DDA.git'

highlight_list: List[str]

highlight_list_submitted: List[str]

input_df: str = 'input_df'

input_df_submission: str = 'input_df_submission'

keywords: List[str]

meta_data: str = 'meta_data'

meta_data_text: str = 'comments_for_submission'

meta_file_uploader_uuid: str = 'meta_file_uploader_uuid'

metric_calc_approach_selector_submitted_uuid: str = 'metric_calc_approach_selector_submitted_uuid'

metric_calc_approach_selector_uuid: str = 'metric_calc_approach_selector_uuid'

metric_plot_labels: List[str]

metric_selector_submitted_uuid: str = 'metric_selector_submitted_uuid'

metric_selector_uuid: str = 'metric_selector_uuid'

params_file_dict: str = 'params_file_dict_lfq_ion_dda_quant'

params_json_dict: str = 'params_json_dict_lfq_ion_dda_quant'

parse_settings_dir: str = '../proteobench/io/parsing/io_parse_settings/Quant/lfq/DDA/ion/QExactive'

placeholder_dataset_selection_container: str = 'placeholder_dataset_selection_container'

placeholder_downloads_container: str = 'placeholder_downloads_container'

placeholder_fig_compare: str = 'placeholder_fig_compare'

placeholder_slider: str = 'placeholder_slider'

placeholder_slider_submitted: str = 'placeholder_slider_submitted'

placeholder_table: str = 'placeholder_table'

placeholder_table_submitted: str = 'placeholder_table_submitted'

prefix_params: str = 'lfq_ion_dda_quant_'

result_perf: str = 'result_perf'

result_performance_submission: str = 'result_performance_submission'

result_plot_uuid: str = 'result_figure_uuid'

result_submitted_plot_uuid: str = 'result_submitted_figure_uuid'

selectbox_id_submitted_uuid: str = 'selectbox_id_submitted'

selectbox_id_uuid: str = 'selectbox_id'

sidebar_category: str = 'DDA'

sidebar_label: str = 'Quant LFQ DDA ion QExactive'

sidebar_path: str = '/Quant_LFQ_DDA_ion_QExactive'

slider_id_submitted_uuid: str = 'slider_id_submitted'

slider_id_uuid: str = 'slider_id'

submit: str = 'submit'

table_id_uuid: str = 'table_id'

table_new_results_uuid: str = 'table_new_results_uuid'

texts

alias of WebpageTexts

title: str = 'DDA Precursor quantification (QExactive)'