proteobench.io.params.msaid module

MSAID parameter parsing.

proteobench.io.params.msaid.extract_params(fname: str, json_file='/home/docs/checkouts/readthedocs.org/user_builds/proteobench/envs/v0.12.1/lib/python3.11/site-packages/proteobench/io/params/json/Quant/quant_lfq_DIA_ion.json') → ProteoBenchParameters

Parse the MSAID parameter file and extract relevant parameters.

Parameters:

fname (str) – The path to the MSAID parameter file (CSV format).

Returns:

The extracted parameters encapsulated in a ProteoBenchParameters object.

Return type:

ProteoBenchParameters