webinterface.pages.pages_variables.Quant.lfq_DIA_ion_diaPASEF_variables module

Variables for the DIA quantification module using diaPASEF.

class webinterface.pages.pages_variables.Quant.lfq_DIA_ion_diaPASEF_variables.VariablesDIAQuantdiaPASEF(all_datapoints: str = 'all_datapoints_dia_quant_diaPASEF', all_datapoints_submission: str = 'all_datapoints_submission_dia_quant_diaPASEF', input_df_submission: str = 'input_df_submission_dia_quant_diaPASEF', result_performance_submission: str = 'result_performance_submission_dia_quant_diaPASEF', submit: str = 'submit_dia_quant_diaPASEF', fig_logfc: str = 'fig_logfc_dia_quant_diaPASEF', fig_metric: str = 'fig_metric_dia_quant_diaPASEF', fig_cv: str = 'fig_CV_violinplot_dia_quant_diaPASEF', fig_ma_plot: str = 'fig_ma_plot_dia_quant_diaPASEF', fig_prefix: str = 'fig_dia_quant_diaPASEF_', result_perf: str = 'result_perf_dia_quant_diaPASEF', meta_data: str = 'meta_data_dia_quant_diaPASEF', input_df: str = 'input_df_dia_quant_diaPASEF', meta_file_uploader_uuid: str = 'meta_file_uploader_uuid_dia_quant_diaPASEF', comments_submission_uuid: str = 'comments_submission_uuid_dia_quant_diaPASEF', check_submission_uuid: str = 'check_submission_uuid_dia_quant_diaPASEF', meta_data_text: str = 'comments_for_submission_dia_quant_diaPASEF', check_submission: str = 'heck_submission_dia_quant_diaPASEF', button_submission_uuid: str = 'button_submission_uuid_dia_quant_diaPASEF', df_head: str = 'df_head_dia_quant_diaPASEF', placeholder_fig_compare: str = 'placeholder_fig_compare_dia_quant_diPASEF', placeholder_table: str = 'placeholder_table_dia_quant_diaPASEF', placeholder_slider: str = 'placeholder_slider_dia_quant_diaPASEF', placeholder_downloads_container: str = 'placeholder_downloads_container_dia_quant_diaPASEF', highlight_list: List[str] = <factory>, first_new_plot: bool = True, default_val_slider: int = 3, max_nr_observed: int = 6, alpha_warning: bool = False, beta_warning: bool = True, archived_warning: bool = False, github_link_pr: str = 'github.com/Proteobot/Results_quant_ion_DIA_diaPASEF.git', sidebar_label: str = 'Quant LFQ DIA ion diaPASEF', sidebar_path: str = '/Quant_LFQ_DIA_ion_diaPASEF', sidebar_category: str = 'DIA', keywords: List[str] = <factory>, selectbox_id_submitted_uuid: str = 'selectbox_id_submitted_dia_quant_diaPASEF', selectbox_id_uuid: str = 'selectbox_id_dia_quant_diaPASEF', selectbox_id_indepth_uuid: str = 'selectbox_id_indepth_dia_quant_diaPASEF', colorblind_mode_selector_uuid: str = 'colorblind_mode_selector_dia_quant_diaPASEF', colorblind_mode_selector_submitted_uuid: str = 'colorblind_mode_selector_submitted_dia_quant_diaPASEF', colorblind_mode_selector_indepth_uuid: str = 'colorblind_mode_selector_indepth_dia_quant_diaPASEF', slider_id_submitted_uuid: str = 'slider_id_submitted_dia_quant_diaPASEF', slider_id_uuid: str = 'slider_id_dia_quant_diaPASEF', slider_id_indepth_uuid: str = 'slider_id_indepth_dia_quant_diaPASEF', download_selector_id_uuid: str = 'download_selector_id_dia_quant_diaPASEF', table_id_uuid: str = 'table_id_dia_quant_diaPASEF', table_new_results_uuid: str = 'table_new_results_uuid_dia_quant_diaPASEF', result_plot_uuid: str = 'result_figure_uuid_dia_quant_diaPASEF', result_submitted_plot_uuid: str = 'result_submitted_figure_uuid_dia_quant_diaPASEF', metric_selector_uuid: str = 'metric_selector_uuid_dia_quant_diaPASEF', metric_selector_submitted_uuid: str = 'metric_selector_submitted_uuid_dia_quant_diaPASEF', metric_selector_indepth_uuid: str = 'metric_selector_indepth_uuid_dia_quant_diaPASEF', metric_calc_approach_selector_submitted_uuid: str = 'metric_calc_approach_selector_submitted_uuid_dia_quant_diaPASEF', metric_calc_approach_selector_uuid: str = 'metric_calc_approach_selector_uuid_dia_quant_diaPASEF', metric_calc_approach_selector_indepth_uuid: str = 'metric_calc_approach_selector_indepth_uuid_dia_quant_diaPASEF', metric_plot_labels: List[str] = <factory>, description_module_md: str = 'pages/markdown_files/Quant/lfq/DIA/ion/diaPASEF/introduction.md', description_files_md: str = 'pages/markdown_files/Quant/lfq/DIA/ion/diaPASEF/file_description.md', description_input_file_md: str = 'pages/markdown_files/Quant/lfq/DIA/ion/diaPASEF/input_file_description.md', description_slider_md: str = 'pages/markdown_files/Quant/lfq/DIA/ion/diaPASEF/slider_description.md', description_table_md: str = 'pages/markdown_files/Quant/lfq/DIA/ion/diaPASEF/table_description.md', description_results_md: str = 'pages/markdown_files/Quant/lfq/DIA/ion/diaPASEF/result_description.md', description_submission_md: str = 'pages/markdown_files/Quant/lfq/DIA/ion/diaPASEF/submit_description.md', all_datapoints_submitted: str = 'all_datapoints_submitted_dia_quant_diaPASEF', placeholder_table_submitted: str = 'placeholder_table_submitted_dia_quant_diaPASEF', placeholder_slider_submitted: str = 'placeholder_slider_submitted_dia_quant_diaPASEF', highlight_list_submitted: List[str] = <factory>, placeholder_dataset_selection_container: str = 'placeholder_dataset_selection_container_dia_quant_diaPASEF', dataset_selector_id_uuid: str = 'dataset_selector_id_dia_quant_diaPASEF', parse_settings_dir: str = '../proteobench/io/parsing/io_parse_settings/Quant/lfq/DIA/ion/diaPASEF', texts: Type[WebpageTexts] = <class 'pages.texts.generic_texts.WebpageTexts'>, doc_url: str = 'https://proteobench.readthedocs.io/en/latest/available-modules/active-modules/5-quant-lfq-ion-dia-diapasef/', title: str = 'DIA Precursor quantification - diaPASEF', additional_params_json: str = '../proteobench/io/params/json/Quant/quant_lfq_DIA_ion.json', prefix_params: str = 'lfq_ion_dia_diapasef_quant_', params_json_dict: str = 'params_json_dict_lfq_ion_dda_diapasef_quant', params_file_dict: str = 'params_file_dict_lfq_ion_dia_diapasef_quant')

Bases: object

Variables for the DIA quantification module using diaPASEF.

additional_params_json: str = '../proteobench/io/params/json/Quant/quant_lfq_DIA_ion.json'

all_datapoints: str = 'all_datapoints_dia_quant_diaPASEF'

all_datapoints_submission: str = 'all_datapoints_submission_dia_quant_diaPASEF'

all_datapoints_submitted: str = 'all_datapoints_submitted_dia_quant_diaPASEF'

alpha_warning: bool = False

archived_warning: bool = False

beta_warning: bool = True

button_submission_uuid: str = 'button_submission_uuid_dia_quant_diaPASEF'

check_submission: str = 'heck_submission_dia_quant_diaPASEF'

check_submission_uuid: str = 'check_submission_uuid_dia_quant_diaPASEF'

colorblind_mode_selector_indepth_uuid: str = 'colorblind_mode_selector_indepth_dia_quant_diaPASEF'

colorblind_mode_selector_submitted_uuid: str = 'colorblind_mode_selector_submitted_dia_quant_diaPASEF'

colorblind_mode_selector_uuid: str = 'colorblind_mode_selector_dia_quant_diaPASEF'

comments_submission_uuid: str = 'comments_submission_uuid_dia_quant_diaPASEF'

dataset_selector_id_uuid: str = 'dataset_selector_id_dia_quant_diaPASEF'

default_val_slider: int = 3

description_files_md: str = 'pages/markdown_files/Quant/lfq/DIA/ion/diaPASEF/file_description.md'

description_input_file_md: str = 'pages/markdown_files/Quant/lfq/DIA/ion/diaPASEF/input_file_description.md'

description_module_md: str = 'pages/markdown_files/Quant/lfq/DIA/ion/diaPASEF/introduction.md'

description_results_md: str = 'pages/markdown_files/Quant/lfq/DIA/ion/diaPASEF/result_description.md'

description_slider_md: str = 'pages/markdown_files/Quant/lfq/DIA/ion/diaPASEF/slider_description.md'

description_submission_md: str = 'pages/markdown_files/Quant/lfq/DIA/ion/diaPASEF/submit_description.md'

description_table_md: str = 'pages/markdown_files/Quant/lfq/DIA/ion/diaPASEF/table_description.md'

df_head: str = 'df_head_dia_quant_diaPASEF'

doc_url: str = 'https://proteobench.readthedocs.io/en/latest/available-modules/active-modules/5-quant-lfq-ion-dia-diapasef/'

download_selector_id_uuid: str = 'download_selector_id_dia_quant_diaPASEF'

fig_cv: str = 'fig_CV_violinplot_dia_quant_diaPASEF'

fig_logfc: str = 'fig_logfc_dia_quant_diaPASEF'

fig_ma_plot: str = 'fig_ma_plot_dia_quant_diaPASEF'

fig_metric: str = 'fig_metric_dia_quant_diaPASEF'

fig_prefix: str = 'fig_dia_quant_diaPASEF_'

first_new_plot: bool = True

github_link_pr: str = 'github.com/Proteobot/Results_quant_ion_DIA_diaPASEF.git'

highlight_list: List[str]

highlight_list_submitted: List[str]

input_df: str = 'input_df_dia_quant_diaPASEF'

input_df_submission: str = 'input_df_submission_dia_quant_diaPASEF'

keywords: List[str]

max_nr_observed: int = 6

meta_data: str = 'meta_data_dia_quant_diaPASEF'

meta_data_text: str = 'comments_for_submission_dia_quant_diaPASEF'

meta_file_uploader_uuid: str = 'meta_file_uploader_uuid_dia_quant_diaPASEF'

metric_calc_approach_selector_indepth_uuid: str = 'metric_calc_approach_selector_indepth_uuid_dia_quant_diaPASEF'

metric_calc_approach_selector_submitted_uuid: str = 'metric_calc_approach_selector_submitted_uuid_dia_quant_diaPASEF'

metric_calc_approach_selector_uuid: str = 'metric_calc_approach_selector_uuid_dia_quant_diaPASEF'

metric_plot_labels: List[str]

metric_selector_indepth_uuid: str = 'metric_selector_indepth_uuid_dia_quant_diaPASEF'

metric_selector_submitted_uuid: str = 'metric_selector_submitted_uuid_dia_quant_diaPASEF'

metric_selector_uuid: str = 'metric_selector_uuid_dia_quant_diaPASEF'

params_file_dict: str = 'params_file_dict_lfq_ion_dia_diapasef_quant'

params_json_dict: str = 'params_json_dict_lfq_ion_dda_diapasef_quant'

parse_settings_dir: str = '../proteobench/io/parsing/io_parse_settings/Quant/lfq/DIA/ion/diaPASEF'

placeholder_dataset_selection_container: str = 'placeholder_dataset_selection_container_dia_quant_diaPASEF'

placeholder_downloads_container: str = 'placeholder_downloads_container_dia_quant_diaPASEF'

placeholder_fig_compare: str = 'placeholder_fig_compare_dia_quant_diPASEF'

placeholder_slider: str = 'placeholder_slider_dia_quant_diaPASEF'

placeholder_slider_submitted: str = 'placeholder_slider_submitted_dia_quant_diaPASEF'

placeholder_table: str = 'placeholder_table_dia_quant_diaPASEF'

placeholder_table_submitted: str = 'placeholder_table_submitted_dia_quant_diaPASEF'

prefix_params: str = 'lfq_ion_dia_diapasef_quant_'

result_perf: str = 'result_perf_dia_quant_diaPASEF'

result_performance_submission: str = 'result_performance_submission_dia_quant_diaPASEF'

result_plot_uuid: str = 'result_figure_uuid_dia_quant_diaPASEF'

result_submitted_plot_uuid: str = 'result_submitted_figure_uuid_dia_quant_diaPASEF'

selectbox_id_indepth_uuid: str = 'selectbox_id_indepth_dia_quant_diaPASEF'

selectbox_id_submitted_uuid: str = 'selectbox_id_submitted_dia_quant_diaPASEF'

selectbox_id_uuid: str = 'selectbox_id_dia_quant_diaPASEF'

sidebar_category: str = 'DIA'

sidebar_label: str = 'Quant LFQ DIA ion diaPASEF'

sidebar_path: str = '/Quant_LFQ_DIA_ion_diaPASEF'

slider_id_indepth_uuid: str = 'slider_id_indepth_dia_quant_diaPASEF'

slider_id_submitted_uuid: str = 'slider_id_submitted_dia_quant_diaPASEF'

slider_id_uuid: str = 'slider_id_dia_quant_diaPASEF'

submit: str = 'submit_dia_quant_diaPASEF'

table_id_uuid: str = 'table_id_dia_quant_diaPASEF'

table_new_results_uuid: str = 'table_new_results_uuid_dia_quant_diaPASEF'

texts

alias of WebpageTexts

title: str = 'DIA Precursor quantification - diaPASEF'