ProteoBench package

• Template
  • Template for module
    • ParseSettings
    • Datapoint
      • Datapoint.MBR
      • Datapoint.calculate_benchmarking_metric_1()
      • Datapoint.calculate_benchmarking_metric_2()
      • Datapoint.dump_json_object()
      • Datapoint.enzyme_name
      • Datapoint.fdr_peptide
      • Datapoint.fdr_protein
      • Datapoint.fdr_psm
      • Datapoint.fragment_tol
      • Datapoint.fragment_tol_unit
      • Datapoint.generate_id()
      • Datapoint.id
      • Datapoint.is_temporary
      • Datapoint.max_pep_length
      • Datapoint.min_pep_length
      • Datapoint.missed_cleavages
      • Datapoint.precursor_tol
      • Datapoint.precursor_tol_unit
      • Datapoint.search_engine
      • Datapoint.software_version
• Modules
  • DDA_Quant
    • Module for quantitative DDA data