import pages.texts.proteobench_builder as pbb
import streamlit as st
from pages.base_pages.banner import display_banner
[docs]
class BaseStreamlitUI:
"""
Streamlit UI for the DDA quantification - precursor ions module.
"""
def __init__(self, variables, texts, ionmodule, parsesettingsbuilder, uiobjects, page_name):
"""
Initialize the Streamlit UI for the DDA quantification - precursor ions module.
"""
self.variables = variables
self.texts = texts
self.user_input = dict()
pbb.proteobench_page_config()
if self.variables.submit not in st.session_state:
st.session_state[self.variables.submit] = False
try:
token = st.secrets["gh"]["token"]
except KeyError:
token = ""
self.ionmodule = ionmodule(token=token)
self.parsesettingsbuilder = parsesettingsbuilder(
module_id=self.ionmodule.module_id, parse_settings_dir=self.variables.parse_settings_dir
)
self.uiobjects = uiobjects(self.variables, self.ionmodule, self.parsesettingsbuilder, page_name=page_name)
[docs]
def main_page(self) -> None:
"""
Set up the main page layout for the Streamlit application.
"""
# Create tabs
(
tab_results_all,
tab_submission_details,
tab_indepth_plots,
tab_results_new,
tab_compare_workflows,
tab_public_submission,
) = st.tabs(
[
"View Public Results",
"Upload New Results (Private)",
"View Single Result",
"View Public + New Results",
"Compare Two Results",
"Submit New Results",
]
)
with tab_results_all:
st.title(self.variables.title)
st.link_button(
"Go to module documentation",
url=self.variables.doc_url,
type="secondary",
help="link to the module documentation",
)
display_banner(self.variables)
self.uiobjects.display_all_data_results_main()
# Tab 2: Submission Details
with tab_submission_details:
st.title(self.variables.title)
st.link_button(
"Go to module documentation",
url=self.variables.doc_url,
type="secondary",
help="link to the module documentation",
)
display_banner(self.variables)
self.uiobjects.display_submission_form()
# Tab 2.5: in-depth plots current data
with tab_indepth_plots:
st.title(self.variables.title)
st.link_button(
"Go to module documentation",
url=self.variables.doc_url,
type="secondary",
help="link to the module documentation",
)
display_banner(self.variables)
self.uiobjects.display_indepth_plots()
# Tab 3: Results (New Submissions)
with tab_results_new:
st.title(self.variables.title)
st.link_button(
"Go to module documentation",
url=self.variables.doc_url,
type="secondary",
help="link to the module documentation",
)
display_banner(self.variables)
self.uiobjects.display_all_data_results_submitted()
# Tab: Compare Workflows
with tab_compare_workflows:
st.title(self.variables.title)
st.link_button(
"Go to module documentation",
url=self.variables.doc_url,
type="secondary",
help="link to the module documentation",
)
display_banner(self.variables)
self.uiobjects.display_workflow_comparison()
# Tab 5: Public Submission
with tab_public_submission:
st.title(self.variables.title)
st.link_button(
"Go to module documentation",
url=self.variables.doc_url,
type="secondary",
help="link to the module documentation",
)
display_banner(self.variables)
self.uiobjects.display_public_submission_ui()
