proteobench.io.params.i2masschroq module#

I2MassChroQ parameter file parser.

proteobench.io.params.i2masschroq.extract_params(fname: Path, json_file='/home/docs/checkouts/readthedocs.org/user_builds/proteobench/envs/v0.15.2/lib/python3.11/site-packages/proteobench/io/params/json/Quant/quant_lfq_DDA_ion.json') → ProteoBenchParameters[source]#

Extract parameters from an i2MassChroQ parameter file and return a ProteoBenchParameters object.

Parameters:

fname (pathlib.Path) – The file path to the i2MassChroQ parameter file.

Returns:

The extracted parameters encapsulated in a ProteoBenchParameters object.

Return type:

ProteoBenchParameters